Avian Immunome DB

UniProt data

Query amino acid sequences, either reviewed (SwissProt) or unreviewed (TrEMBL).

Only the canonical name of each gene is used in the results table. The alternative gene names (synonyms) are shown below the table.

Data can be downloaded as ZIP file of FASTA files (one FASTA file per gene).

Direct access to the gene information at the UNIPROT web pages is given via hyperlinks.

Each protein of the results table can be blasted at NCBI via direct link.

Select from Genes and Species, and optionally choose a download option in Result handling. Then click search.

Genes

Select genes by marking them in the left list (available). Then click on the → arrow.

Deselect genes bei marking them in the right list (selected). Then click on the ← arrow.

The usual behavior of Ctrl+click and Shift+click is supported.

Alternatively, you can enter the gene symbols in the textbox below and hit the TAB key.

Species

You have to select at least one entry in one category.

You can deselect an entry by Ctrl+click.

class

order

family

genus

species

Result handling

Result

If selected, results will open in a new tab (or window).

Download options

display metadata: displays the data selected in Show columns

download sequences: creates a zip file of FASTA files; one FASTA file per translated gene

Show columns

Select columns to be displayed.

Credibility

reviewed: SwissProt

unreviewed: TrEMBL

all: both, reviewed and unreviewed